Publications du réseau


Les nom en gras et sans étoiles sont des membres du CNRLE Les nom en gras et avec étoile sont des membres du laboratoire collaborateur Les nom en gras et avec deux étoiles sont des membres du laboratoire du réseau


  • Cryptosporidium-Biofilm Interactions: a Review. LEFEBVRE M, RAZAKANDRAINIBE R, VILLENA I**, FAVENNEC L, COSTA D.Appl Environ Microbiol. 2021 Jan 15;87(3):e02483-20.
  • Assessment of a Multiplex PCR for the Simultaneous Diagnosis of Intestinal Cryptosporidiosis and Microsporidiosis: Epidemiologic Report from a French Prospective Study. MONIOT M, NOURRISSON C**, FAURE C, DELBAC F, FAVENNEC L, DALLE F*, GARROUSTE C, POIRIER P**.J Mol Diagn. 2021 Apr;23(4):417-423.
  •  Target Identification of an Antimalarial Oxaborole Identifies AN13762 as an Alternative Chemotype for Targeting CPSF3 in Apicomplexan Parasites. BELLINI V, SWALE C, BRENIER-PINCHART MP**, PEZIER T, GEORGEAULT S, LAURENT F, HAKIMI MA, BOUGDOUR A.iScience. 2020 Nov 27;23(12):101871.2021
  • Detection of Infectious Cryptosporidium parvum Oocysts from Lamb’s Lettuce: CC-qPCR’s Intake. Page 30 sur 50 KUBINA S, COSTA D, FAVENNEC L, GARGALA G, ROUSSEAU A, VILLENA I**, LA CARBONA S, RAZAKANDRAINIBE R. Microorganisms. 2021 Jan 21;9(2):215.
  • Multicenter Evaluation of an ELISA for the Detection of Cryptosporidium spp. Antigen in Clinical Human Stool Samples. RAZAKANDRAINIBE R, MÉRAT C, KAPEL N**, SAUTOUR M**, GUYOT K**, GARGALA G, BALLET JJ*, LE PAPE P**; FRENCH CRYPTOSPORIDIOSIS NETWORK, DALLE F*, FAVENNEC L.Microorganisms. 2021 Jan 20;9(2):209.
  • Comparative Study of Eleven Mechanical Pretreatment Protocols for Cryptosporidium parvum DNA Extraction from Stool Samples. CLAUDEL L, VALEIX N, BASMACIYAN L*, PEREIRA B, COSTA D, VINCENT A, VALOT S*, FAVENNEC L, DALLE F*.Microorganisms. 2021 Feb 2;9(2):297.
  • Case Report: Two Cases of Cryptosporidiosis in Heavily Pretreated Patients With Myeloma. DEMONCHY J, CORDIER C, FRÉALLE E**, DEMARQUETTE H, HERBAUX C, ESCURE G, WILLAUME A, VAN DE WYNGAERT Z, NOEL MP, FACON T, FAURE K, CARO J, MORGAN G, DAVIES FE, ALFANDARI S, BORIES C, BOYLE EM.Clin Lymphoma Myeloma Leuk. 2021 Feb 2:S2152-2650(21)00037-9.
  • Systemic efficacy on Cryptosporidium parvum infection of aminoxanide (RM-5061), a new aminoacid ester thiazolide prodrug of tizoxanide. DIAWARA EH, FRANÇOIS A, STACHULSKI AV, RAZAKANDRAINIBE R, COSTA D, FAVENNEC L, ROSSIGNOL JF, GARGALA G.Parasitology. 2021 Mar 29:1-10.
  • Occurrence of Ten Protozoan Enteric Pathogens in Three Non-Human Primate Populations. MENU E**, DAVOUST B, MEDIANNIKOV O, AKIANA J, MULOT B, DIATTA G, LEVASSEUR A, RANQUE S, RAOULT D, BITTAR F.Pathogens. 2021 Mar 2;10(3):280.
  • Disseminated Cryptosporidium infection in an infant with CD40L deficiency. DUPUY F, VALOT S*, DALLE F*, STERIN A, L’OLLIVIER C**.IDCases. 2021 Apr 7;24:e01115.
  • ‘Seven shades of Cryptosporidium’. CRESTIA J, RAZAKANDRAINIBE R, COSTA D, DAMIANI C**, TOTET A**, LE GOVIC Y**.Clin Microbiol Infect. 2021 Apr 29:S1198-743X(21)00210-X.
  • Comparative Performance of Eight PCR Methods to Detect Cryptosporidium species. COSTA D, SOULIEUX L, RAZAKANDRAINIBE R, BASMACIYAN L*, GARGALA G, VALOT S*, DALLE F*, FAVENNEC L. Pathogens. 2021 May 23;10(6):647.
  • Risk factors for sporadic cryptosporidiosis : A systematic review and meta-analysis.KOOH P, THÉBAULT A, CADAVEZ V, GONZALES-BARRON U, VILLENA I**.Microbial analysis. 2021, 17 100116.
  • Commercial Simplex and Multiplex PCR Assays for the Detection of Intestinal Parasites Giardia intestinalis, Entamoeba spp., and Cryptosporidium spp.: Comparative Evaluation of Seven Commercial PCR Kits with Routine In-House Simplex PCR Assays. BASMACIYAN L*, FRANÇOIS A, VINCENT A, VALOT S*, BONNIN A*, COSTA D, RAZAKANDRAINIBE R, MORIO F**, FAVENNEC L, DALLE F*. Microorganisms. 2021 Nov 10;9(11):2325.
  • Protozoan Parasites and Leafy Greens in Marrakech: Study of Occurrence Using a Molecular Method. BERROUCH S, ESCOTTE-BINET S, MADLINE A, AUBERT D**, NAST E, LA CARBONA S, HOUMMADI L, HAFID J, VILLENA I**. Acta Parasitol. 2021 Nov 20. doi: 10.1007/s11686-021-00488-z.
  • Blue mussel (Mytilus edulis)-A bioindicator of marine water contamination by protozoa: Laboratory and in situ approaches. BIGOT-CLIVOT A, LA CARBONA S, CAZEAUX C, DURAND L, GEBA E, LE FOLL F, XUEREB B, CHALGHMI H, DUBEY JP, BASTIEN F, BONNARD I, PALOS LADEIRO M, ESCOTTE-BINET S, AUBERT D**, VILLENA I**, GEFFARD A. J Appl Microbiol. 2022 Jan;132(1):736-746. doi: 10.1111/jam.15185. Epub 2021 Jul 28.
  • Molecular characterization of Cryptosporidium spp. from humans in Ethiopia. Hailu AW, DEGAREGE A, ADAMU H, COSTA D, VILLIER V, MOUHAJIR A, FAVENNEC L, RAZAKANDRAINIBE R, PETROS B. PLoS One. 2021 Jun 11;16(6):e0253186. doi: 10.1371/journal.pone.0253186.


  • Cryptosporidiosis and microsporidiosis as causes of diarrhea in kidney and/or pancreas transplant recipients. DELTOMBE C, LEFEBVRE M, MORIO F**, BOUTOILLE D, IMBERT BM, LE PAPE P**, RAFFI F, HOURMANT M.Med Mal Infect. 2020 Aug;50(5):407-413
  • Use of the bivalve Dreissena polymorpha as a biomonitoring tool to reflect the protozoan load in freshwater bodies. GÉBA E, AUBERT D**, DURAND L, ESCOTTE S, LA CARBONA S, CAZEAUX C, BONNARD I, BASTIEN F, PALOS LADEIRO M, DUBEY JP, VILLENA I**, GEFFARD A, BIGOT-CLIVOT A.Water Res. 2020 Mar 1;170:115297.
  • Detection methods and prevalence of transmission stages of Toxoplasma gondii, Giardia duodenalis and Cryptosporidium spp. in fresh vegetables : a review. BERROUCH S, ESCOTTE-BINET S, HARRAK R, HUGUENIN A**, FLORI P, FAVENNEC L, VILLENA I**, HAFID J.Parasitology. 2020 Apr;147(5):516-532.
  • Update on Cryptosporidium spp.: highlights from the Seventh International Giardia and Cryptosporidium Conference. WIDMER G, CARMENA D, KVÁČ M, CHALMERS RM, KISSINGER JC, XIAO L, SATERIALE A, STRIEPEN B, LAURENT F, LACROIX-LAMANDÉ S, GARGALA G, FAVENNEC L.Parasite. 2020;27:14.
  • P Cryptosporidiosis after treatment with fingolimod: a case report and pharmacovigilance review. MARTINOT M, ABOU-BACAR A, LAMOTHE M, TEBACHER MA, ZADEH MM, DALLE F*, FAVENNEC L, COSTA D, BRUNET J**, SELLAL F. BMC Infect Dis. 2020 Mar 30;20(1):257. Page 29 sur 50
  • Evaluation of the AllplexTM Gastrointestinal Panel-Parasite Assay for Protozoa Detection in Stool Samples: A Retrospective and Prospective Study. AUTIER B, GANGNEUX JP, ROBERT-GANGNEUX F**.Microorganisms. 2020 Apr 15;8(4):569.
  • Cryptosporidiosis in HIV-positive patients and related risk factors: A systematic review and metaanalysis. AHMADPOUR E, SAFARPOUR H, XIAO L, ZAREAN M, HATAM-NAHAVANDI K, BARAC A, PICOT S**, RAHIMI MT, RUBINO S, MAHAMI-OSKOUEI M, SPOTIN A, NAMI S, BAGHI HB.Parasite. 2020;27:27.
  • Genetic basis for virulence differences of various Cryptosporidium parvum carcinogenic isolates. AUDEBERT C, BONARDI F, CABOCHE S, GUYOT K**, TOUZET H, MERLIN S, GANTOIS N, CREUSY C, MELONI D, MOURAY A, VISCOGLIOSI E, CERTAD G, BENAMROUZ-VANNESTE S, CHABÉ M.Sci Rep. 2020 Apr 30;10(1):7316.
  • Survival and infectivity of Toxoplasma gondii and Cryptosporidium parvum oocysts bioaccumulated by Dreissena polymorpha. GÉBA E, ROUSSEAU A, LE GUERNIC A, ESCOTTE-BINET S, FAVENNEC L, LA CARBONA S, GARGALA G, DUBEY JP, VILLENA I**, BETOULLE S, AUBERT D**, BIGOTCLIVOT A.J Appl Microbiol. 2021 Feb;130(2):504-515.
  • Detection of intestinal parasites: Importance of the concentration method used. LEMETEIL D, GARGALA G, ANQUETIL LE, RAZAKANDRAINIBE R, BALLET JJ, FAVENNEC L, COSTA D.Travel Med Infect Dis. 2020 Nov-Dec;38:101828.
  • Update on Giardia: Highlights from the seventh International Giardia and Cryptosporidium Conference. BURET AG, CACCIÒ SM, FAVENNEC L, SVÄRD S.Parasite. 2020;27:49.
  • Multicenter Comparative Study of Six Cryptosporidium parvum DNA Extraction Protocols Including Mechanical Pretreatment from Stool Samples. VALEIX N, COSTA D, BASMACIYAN L*, VALOT S*, VINCENT A, RAZAKANDRAINIBE R, ROBERT-GANGNEUX F**, NOURRISSON C**, PEREIRA B, FRÉALLE E**, POIRIER P**, FAVENNEC L, DALLE F*.Microorganisms. 2020 Sep 22;8(9):1450.
  • Evaluation of a modified method for the detection of Cryptosporidium oocysts on spinach leaves. RAZAKANDRAINIBE R, KUBINA S, COSTA D, ROBINSON G, LA CARBONA S**, AUBERT D**, DAVID A, GARGALA G, VILLENA I**, FAVENNEC L, CHALMERS RM. Food Waterborne Parasitol. 2020 Oct 6;21:e00097.
  • Asymptomatic Cryptosporidium infections in ewes and lambs are a source of environmental contamination with zoonotic genotypes of Cryptosporidium parvum. BORDES L, HOUERT P, COSTA D, FAVENNEC L, VIAL-NOVELLA C, FIDELLE F, GRISEZ C, PREVOT F, JACQUIET P, RAZAKANDRAINIBE R.Parasite. 2020;27:57.
  • Cryptosporidium spp., Giardia duodenalis and Toxoplasma gondii detection in fresh vegetables consumed in Marrakech, Morocco. BERROUCH S, ESCOTTE-BINET S, AMRAOUZA Y, FLORI P, AUBERT D**, VILLENA I**, HAFID J. Afr Health Sci. 2020 Dec;20(4):1669-1678.


  • Multiplex PCR reveals a high prevalence of multiple pathogens in traveller’s diarrhoea in children. POULETTY M, DE PONTUAL L, LOPEZ M, MORIN L, POILANE I, PHAM LL, CARBONNELLE E, TITOMANLIO L, FAYE A, BONACORSI S**. Arch Dis Child. 2019 Feb;104(2):141-146.
  • Rapid diagnostic tests relying on antigen detection from stool as an efficient point of care testing strategy for giardiasis and cryptosporidiosis? Evaluation of a new immunochromatographic duplex assay. GOUDAL A, LAUDE A, VALOT S*, DESOUBEAUX G**, ARGY N**, NOURRISSON C**, POMARES C**, MACHOUART M**, LE GOVIC Y**, DALLE F*, BOTTEREL F**, BOURGEOIS N**, CATEAU E**, LETERRIER M, LAVERGNE RA**, BESER J, LE PAPE P**, MORIO F**. Diagn Microbiol Infect Dis. 2019 Jan;93(1):33-36.
  • Assessment of the first commercial multiplex PCR kit (ParaGENIE Crypto-Micro Real-Time PCR) for the detection of Cryptosporidium spp., Enterocytozoon bieneusi, and Encephalitozoon intestinalis from fecal samples. MORIO F**, POIRIER P**, LE GOVIC Y**, LAUDE A, VALOT S*, DESOUBEAUX G**, ARGY N**, NOURRISSON C**, POMARES C**, MACHOUART M**, DALLE F*, BOTTEREL F**, BOURGEOIS N**, CATEAU E**, LETERRIER M, BESER J, LAVERGNE RA**, LE PAPE P**. Diagn Microbiol Infect Dis. 2019 Sep;95(1):34-37.
  • Prevalence, Molecular Identification, and Risk Factors for Cryptosporidium Infection in Edible Marine Fish: A Survey Across Sea Areas Surrounding France. CERTAD G, FOLLET J, GANTOIS N, HAMMOUMA-GHELBOUN O, GUYOT K**, BENAMROUZ-VANNESTE S, FRÉALLE E**, SEESAO Y, DELAIRE B, CREUSY C, EVEN G, VERREZ-BAGNIS V, RYAN U, GAY M, ALIOUAT-DENIS C, VISCOGLIOSI E. Front Microbiol. 2019 May 15;10:1037.
  • Comparative Evaluation of Commercial Concentration Procedures for Human Intestinal Parasite Detection.. LEMÉTEIL D., GARGALA G., RAZAKANDRAINIBE R. , BALLET JJ, FAVENNEC L., COSTA D. Laboratory Medicine. 2019, Jul 16;50(3):243-248.
  • 7th international Giardia and Cryptosporidium conference. June 26 – 26, 2019. Rouen, France
    > Summary report
    > 7th IGCC : Conference abstracts on USB Key
  • Goudal A, Laude A, Valot S*, Desoubeaux G**, Argy N**, Nourrisson C**, Pomares C**, Machouart M, Le Govic Y**, Dalle F*, Botterel F**, Bourgeois N, Cateau E**, Leterrier M, Lavergne RA**, Beser J, Le Pape P**, Morio F**. Rapid diagnostic tests relying on antigen detection from stool as an efficient point of care testing strategy forgiardiasis and cryptosporidiosis ? Evaluation of a new immunochromatographic duplex assay. Diagn Microbiol Infect Dis. 2019 Jan ; 93(1) : 33-36.
    > Lien vers PubMed


  • Autier B, Belaz S, Razakandrainibe R, Gangneux JP**, Robert-Gangneux F**. Comparison of three commercial multiplex PCR assays for the diagnosis ofintestinal protozoa. Parasite. 2018 ; 25:48.
    > Lien vers PubMed
  • Costa D, Razakandrainibe R, Sautour M*, Valot S*, Basmaciyan L*, Gargala G,Lemeteil D; French national network on surveillance of human Cryptosporidiosis, Favennec L, Dalle F*. Human cryptosporidiosis in immunodeficient patients in France (2015-2017). Exp Parasitol. 2018 Sep ; 192 : 108-112.
    > Lien vers PubMed
  • Pouletty M, De Pontual L, Lopez M, Morin L, Poilane I, Pham LL, Carbonnelle E,Titomanlio L, Faye A, Bonacorsi S**. Multiplex PCR reveals a high prevalence of multiple pathogens in traveller’s diarrhoea in children. Arch Dis Child. 2018 Jul 7. pii : archdischild-2017-314327.
    > Lien vers PubMed
  • Mosnier E**, Martin N, Razakandrainibe R, Dalle F*, Roux G, Buteux A, Favennec L, Brousse P, Guarmit B, Blanchet D**, Epelboin L, Girouin C, Martin E, Djossou F, Nacher M, Demar M**. Cryptosporidiosis Outbreak in Immunocompetent Children from a Remote Area of French Guiana. Am J Trop Med Hyg. 2018 Jun ; 98(6) : 1727-1732.
    > Lien vers PubMed
  • Razakandrainibe R, Diawara EHI, Costa D, Le Goff L, Lemeteil D, Ballet JJ,Gargala G, Favennec L. Common occurrence of Cryptosporidium hominis inasymptomatic and symptomatic calves in France. PLoS Negl Trop Dis. 2018 Mar29 ; 12(3) : e0006355.
    > Lien vers PubMed
  • Menu E**, Mary C, Toga I, Raoult D, Ranque S, Bittar F. Evaluation of two DNAextraction methods for the PCR-based detection of eukaryotic enteric pathogens in fecal samples. BMC Res Notes. 2018 Mar 27 ; 11(1) : 206.
    > Lien vers PubMed
  • Rousseau A, La Carbona S, Dumètre A, Robertson LJ, Gargala G, Escotte-Binet S, Favennec L, Villena I**, Gérard C, Aubert D**. Assessing viability and infectivity of foodborne and waterborne stages (cysts/oocysts) of Giardia duodenalis, Cryptosporidium spp., and Toxoplasma gondii : a review of methods. Parasite. 2018 ; 25 : 14.
    > Lien vers PubMed
  • Bai J, Liu X, Le Goff L, Gargala G, François A, Ballet JJ, Ducrotte P, Favennec L, Towledahong L. Octreotide modulates the expression of somatostatin receptor subtypes in inflamed rat jejunum induced by Cryptosporidium parvum. PLoS One. 2018 Mar 9 ; 13(3) : e0194058.
    > Lien vers PubMed
  • Essid R, Menotti J**, Hanen C, Aoun K, Bouratbine A. Genetic diversity ofCryptosporidium isolates from human populations in an urban area of Northern Tunisia. Infect Genet Evol. 2018 Mar ; 58:237-242.
    > Lien vers PubMed


  • Osman M, Benamrouz S, Guyot K, Baydoun M, Frealle E**, Chabe M, Gantois N,Delaire B, Goffard A, Aoun A, Jurdi N, Dabboussi F, Even G, Slomianny C, Gosset P, Hamze M, Creusy C, Viscogliosi E, Certad G. High association ofCryptosporidium spp. infection with colon adenocarcinoma in Lebanese patients. PLoS One. 2017 Dec 19 ;12(12) : e0189422.
    > Lien vers PubMed
  • Gargala G, Razakandrainibe R, Costa D, Leméteil D, Dumant Forest C.[Cryptosporidiosis, a cause of acute diarrhea: A review and retrospective study of cases in Rouen university hospital’s pediatrics department]. Arch Pediatr. 2017 Dec ; 24(12) : 1344-1349.
    > Lien vers PubMed
  • Lanternier F, Amazzough K, Favennec L, Mamzer-Bruneel MF, Abdoul H, Tourret J, Decramer S, Zuber J, Scemla A, Legendre C, Lortholary O, Bougnoux ME; ANOFEL Cryptosporidium National Network and Transplant Cryptosporidium Study Group. Cryptosporidium spp. Infection in Solid Organ Transplantation: The Nationwide “TRANSCRYPTO” Study. Transplantation. 2017 Apr ; 101(4) : 826-830.
    > Lien vers PubMed

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